ClusterDEIUserGuide
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1. Overview of the Cluster DEI Platform
2. Using Slurm
3. SLURM Job Examples
4. SLURM Troubleshooting
5. Using Singularity
6. Singularity workflow
7. Singularity Examples
8. Frequently Asked Questions
ClusterDEIUserGuide
Cluster DEI User Guide
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Cluster DEI User Guide
1. Overview of the Cluster DEI Platform
2. Using Slurm
2.1. Slurm Partitions
2.1.1. Which partition should I use?
2.1.2. Important things to remember
2.2. Slurm Jobs
2.2.1. Dissection of the job file
2.2.2. Slurm mandatory options
2.2.3. A more complete job
2.3. SLURM Interaction
2.3.1. Submit a job
2.3.2. Checking job status
2.3.3. Checking running jobs
2.3.4. Remove a job
2.3.5. Job accounting
2.3.6. Job efficiency
2.3.7. Slurm vs SGE commands
3. SLURM Job Examples
3.1. MATLAB job
3.2. MPI job
3.3. OpenMP job
3.4. GPU Job
3.5. Interactive Job
3.6. Singularity Job
3.7. Singularity job using GPU
4. SLURM Troubleshooting
5. Using Singularity
5.1. Why singularity?
6. Singularity workflow
6.1. Building the singularity image
6.2. Running the singularity image locally
6.3. Running the singularity image on cluster
7. Singularity Examples
7.1. Tensorflow + python packages
7.1.1. Description
7.1.2. Singularity file
7.1.3. Build and run
7.2. Reuse and customize a local image
7.2.1. Description
7.2.2. Singularity file
7.2.3. Build and run
8. Frequently Asked Questions
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